Phylogenetic analysis in R (Estimation of phylogenetic trees and networks using Maximum Likelihood, Maximum Parsimony, Distance methods & Hadamard conjugation)
| Version: | 1.7-4 |
| Depends: | R (≥ 2.15.0), ape (≥ 3.0-8), rgl, igraph (≥ 0.6), Matrix |
| Imports: | quadprog |
| LinkingTo: | ape |
| Suggests: | parallel, seqLogo, seqinr, xtable, flashClust, phytools |
| Published: | 2013-04-04 |
| Author: | Klaus Schliep, Emmanuel Paradis |
| Maintainer: | Klaus Schliep <klaus.schliep at gmail.com> |
| License: | GPL (≥ 2) |
| NeedsCompilation: | yes |
| Citation: | phangorn citation info |
| In views: | Genetics, Phylogenetics |
| CRAN checks: | phangorn results |
| Package source: | phangorn_1.7-4.tar.gz |
| MacOS X binary: | phangorn_1.7-4.tgz |
| Windows binary: | phangorn_1.7-4.zip |
| Reference manual: | phangorn.pdf |
| Vignettes: |
Ancestral sequence Reconstruction Constructing phylogenetic trees Advanced features |
| News/ChangeLog: | NEWS |
| Old sources: | phangorn archive |
| Reverse depends: | coalescentMCMC, corHMM, OUwie, poppr |
| Reverse imports: | kdetrees, paleotree, phytools, poppr |